B.Sc. BOTANY PART I LESSION 1

                                                      

                                                        LESSION—1

                               Diversity  Of  Microbes  : Introduction

Microorganisms, or the microbes as they are commonly called, are smallest living organisms. They are so small that we cannot see them without magnifying them about 500 times with a microscope. Microbes live almost everywhere on earth. Incredible as it may seem, some grow at boiling temperatures in hot springs and at over 1100C in undersea volcanic hydrothermal vents. Others live in ice at temperatures below freezing point. Some live in very acidic environments (pH=1.0) while others are found in saturated salt solutions microbes have also been found even in harsh environment of Antarctica.

       Microbes preceded humans on earth by billions of years. Thus we have evolved in their world and, more recently, they they in ours. For this reason, it should not seem surprising that microbes live intimately with us on and in our bodies. Without our permission they inhabit all of our orifices, including our mouth, nose, ears, eyes and anal and genito-urinary tracts. However, most of them are harmless symbionts using our bodies as their home and also protect us from pathogenic species.

The major groups of microbes include bacteria, algae, fungi, viruses and protozoa. Like higher plants and animals, most microbes are alive and consist of one or more cells. Viruses, however, are acellular entities on the borderline between the living and non-living; they behave like living organisms when they gain entry to cells. Microbes range in size from small viruses (20  nm   in   diameter). to large protozoans (5   mm  or  more  in  diameter). Thus largest microbes are as 2,50,000 times the size of the smallest ones.

                                   Position  of  Microbes  in  the              

                                              Living  World

The earliest system of classification categorized living organisms in just two groups---- Animalia and the Plantae. Microbes were placed in either kingdom of the basis of their ability of active movement and photosynthesis. Ernst Haeckel in 1866 proposed a third group protista to include some relatively simple biological forms. Some of the protists lacked nucleus (e.g., bacteria) and some were nucleated organisms (e.g., protozoa, algae and fungi).

With the advent of electron microscopy, the differences in the ultrastructure of cells become apparent. It led the scientists to establish two different cell organization--- Prokaryotic and eukaryotic. In prokaryotic cells the nuclear material is not surrounded by a nuclear membrane; it includes bacteria and cyanobacteria (blue-green algae). The eukaryotic cell organization is, however much more complex with each cell organelle having its own limiting membrane (Table  1). All animals and plants (including algae and fungi) have eukaryotic cell organization.

     (1)     Complexity  of  body  structure; i.e., whether the cell is prokaryotic or eukaryotic.

    (2)    Complexity  of  body  organization; i.e., whether the organism is unicellular and simple or multicellular and complex.

     (3)    Mode  of  nutrition; i.e., the methods used by organisms to obtain nourishment. It may be autotrophic   (photosynthetic) or heterotrophic  (take  food  by  ingestion  or  absorption).

Whittaker divided organisms into following five kingdoms. He placed all prokaryotes in the kingdom monera and most unicellular simple eukaryotes in the kingdom protista. He considered fungi, which acquire solely by absorption, sufficiently different from plants.

(I)         Kingdom--Monera

(Kingdom  of  Prokaryotes)    

Kingdom monera includes all prokaryotic organisms---eubacteria (true  bacteria), cynobacteria and archaebacteria. All monerans are unicellular, they lack true nuclei and other membrane bound organelles, such as mitochondria, plastid, lysosomes, etc. Their DNA is without histones (proteins) and is found in the form of single chromosome. Monerans reproduce chiefly by binary fission or may undergo genetic recombination. Monera are important decomposers and mineralisers in the biosphere.

[II] Kingdom—Protista

      (Kingdom    of   unicellular   eukaryotes)

All protists are unicellular eukaryotic organisms. They possess true nucleus and other membrane bound organelles, such as mitochondria, chloroplast endoplasmic, reticulum etc. Most of the protists possess flagella or cilia at some stage during their life cycle. Protists are extremely complex; their cells show even more diversity than is found among the cells in multicellular kingdoms.

They do not develop from an embryo as plants and animals do. The kingdom includes a variety of life forms. For example among the protists are algae which resemble plants (e.g., diatoms), the protozoa which resemble animals (e.g., amoeba, paramecium) and euglenoids (e.g., euglena) which have both plant and animal characteristics.

     Protists are either autotrophic (photosynthetic) or holozoic which feed on other protists by ingestion. A few protists live on animals an parasites.

[iii] Kingdom—Fungi

       (kingdom  of  multicellular  decomposers)

This kingdom includes unicellular (e.g., yeasts), multicellular (e.g., molds) and macroscopic (e.g., mushrooms) fungi. In multicellular fungi the cells join together to form thin tubes called hyphae. The cell wall of fungi is mostly made of chitin.

    All fungi lack chlorophyll. They are either saprophytes (obtaining  food  from  dead  and  decaying  plant or animal  matter) or parasites (obtaining food from living organisms). Although fungi have some characteristics in common with plants but their mode of nutrition and certain reproductive processes are not shared with any other organisms.

[iv] Kngdom-plantae (kingdom of multicellular producer)

Kingdom planetae includes multicelluar autotrophic plants, viz., thallophytes and trachephytes. These organisms are characterized by the presence of a cell wall made  of cellulose. The main groups included in this kingdom are sea weeds like green, red and brown alage. All mosses, frense, conifers and flowering plants.

Plants are characterized by the presence, of photosynthetic pigment ___cholorophyll and are the only organisms which have the capacity to synthesize  complex organic molecules from carbon dioxide and water utilizing the light energy trapped by the chlorophyll molecules as the source of energy. Thus they are the primary producers on land and along sea shores.

[v] Kingdom-Animalia (kingdom of multicellular consumers)       

This kingdom included multicellular animals (invertebrates and vertebrates). They are heterotrophic and obtain energy by ingesting organic matter. Animal cells do not posses cell wall, plastids and central vacuole. All animals are derived from zygote. They show organ-system organization. Very few animals show cellular organization (e.g., sponges). Or tissue organization (e.g., Hydra). Animals show locomotion which is made possible by well developed muscular cell.

Although Whittaker’s system is the most widely accepted system of classification, it has certain anomalies. For example, the kingdoms Monera and Protista are still heterogeneous. Both these kingdoms include walled and wall less organisms, photosynthetic and non- photosynthetic organisms,  and unicellular and filamentous  or mycelia forms. Besides this, in Whittaker’s system algae have been separated in three kingdoms__ blue-green algae in kingdom Monera, unicellular algae in kingdom Protista and multicellular algae in kingdomPlantae.

A detailed study of the nucleotide sequence of tRNA in the ribosomes of different types of cells revealed that there are distinctly two different types of cells on prokaryotes. Thus now we know three kinds of cells organization in the organisms _

Two prokaryotic and one eukaryotic. Accordingly Carl Woese (1978) proposed a three Domain system for the classification of organisms. The rank of the Domain is above kingdom. The three Domains Woese recognized are __ Eubacteria, Archaea (Archaebacteria) and Eucarya. The Eubacteria includes prokaryotes which contain peptidoglycan in their cell wall (e.g., gram positive and gram negative bacteria, mycoplasmas).

The domain Archaea includes three kingdoms___the methanogens. extreme halophiles and thermacidophiles. The methanogens are strict anaerobes and have been isolate from divergent anaerobic environments such as waterlogged soil-like sediments, marshes, marine sediments and gastrointestinal tracts of animals including human. They produce methane from carbon dioxide and hydrogen. The extreme halophiles  occure in highly saline environments such as salt lakes, salt evaporation ponds and surface of salt preserved food. These are obligate anaerobes. Thermoacidophiles grow in hot acidic environments such as hot water springs, geothermally heated marine sediments and submarine hydrothermal vents. They are obligate aerobes, facultative aerobes or obligate anaerobes.

A comparison of the three cell types as proposed by Carl Woese is given in Table 2.

    

      














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